Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
P04214 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
P04214 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
P04214 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
P04214 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
P04214 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
P04214 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.42■□□□□ 0.86
P04214 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.42■□□□□ 0.86
P04214 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
P04214 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
P04214 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
P04214 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
P04214 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
P04214 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
P04214 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.41■□□□□ 0.86
P04214 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
P04214 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
P04214 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
P04214 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
P04214 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04214 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04214 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04214 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
P04214 Gm6576-201ENSMUST00000169678 883 ntBASIC20.4■□□□□ 0.86
P04214 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
P04214 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
P04214 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04214 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
P04214 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
P04214 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
P04214 Gm13836-201ENSMUST00000121159 501 ntBASIC20.39■□□□□ 0.85
P04214 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
P04214 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04214 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.39■□□□□ 0.85
P04214 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
P04214 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
P04214 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
P04214 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.38■□□□□ 0.85
P04214 Gm2559-201ENSMUST00000201323 363 ntBASIC20.38■□□□□ 0.85
P04214 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.38■□□□□ 0.85
P04214 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
P04214 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
P04214 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
P04214 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P04214 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
P04214 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04214 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
P04214 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.36■□□□□ 0.85
P04214 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.36■□□□□ 0.85
P04214 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.36■□□□□ 0.85
P04214 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04214 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
P04214 Dio3-201ENSMUST00000097228 1449 ntBASIC20.36■□□□□ 0.85
P04214 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
P04214 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.35■□□□□ 0.85
P04214 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.35■□□□□ 0.85
P04214 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
P04214 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
P04214 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.34■□□□□ 0.85
P04214 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
P04214 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
P04214 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
P04214 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
P04214 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04214 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04214 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04214 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.33■□□□□ 0.85
P04214 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.33■□□□□ 0.85
P04214 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
P04214 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
P04214 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms