Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Col4a1P02463 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Col4a1P02463 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
Col4a1P02463 Gm10252-201ENSMUST00000209541 832 ntBASIC24.11■■□□□ 1.45
Col4a1P02463 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Col4a1P02463 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Col4a1P02463 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Col4a1P02463 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Col4a1P02463 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC24.1■■□□□ 1.45
Col4a1P02463 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col4a1P02463 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Col4a1P02463 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Col4a1P02463 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col4a1P02463 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC24.09■■□□□ 1.45
Col4a1P02463 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col4a1P02463 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Col4a1P02463 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col4a1P02463 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Col4a1P02463 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Col4a1P02463 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC24.08■■□□□ 1.45
Col4a1P02463 Gm20760-201ENSMUST00000179197 648 ntBASIC24.08■■□□□ 1.45
Col4a1P02463 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC24.08■■□□□ 1.45
Col4a1P02463 Gm32699-201ENSMUST00000221728 1988 ntBASIC24.08■■□□□ 1.45
Col4a1P02463 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col4a1P02463 Gm37563-201ENSMUST00000192580 1513 ntBASIC24.08■■□□□ 1.45
Col4a1P02463 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Col4a1P02463 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Col4a1P02463 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Col4a1P02463 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC24.08■■□□□ 1.44
Col4a1P02463 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
Col4a1P02463 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC24.07■■□□□ 1.44
Col4a1P02463 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.07■■□□□ 1.44
Col4a1P02463 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Col4a1P02463 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
Col4a1P02463 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Col4a1P02463 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Col4a1P02463 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC24.06■■□□□ 1.44
Col4a1P02463 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC24.06■■□□□ 1.44
Col4a1P02463 Gm27275-201ENSMUST00000184318 272 ntBASIC24.06■■□□□ 1.44
Col4a1P02463 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col4a1P02463 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Col4a1P02463 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC24.06■■□□□ 1.44
Col4a1P02463 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Col4a1P02463 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Col4a1P02463 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC24.05■■□□□ 1.44
Col4a1P02463 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC24.05■■□□□ 1.44
Col4a1P02463 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Col4a1P02463 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col4a1P02463 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Col4a1P02463 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC24.04■■□□□ 1.44
Col4a1P02463 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC24.04■■□□□ 1.44
Col4a1P02463 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
Col4a1P02463 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Col4a1P02463 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.04■■□□□ 1.44
Col4a1P02463 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC24.04■■□□□ 1.44
Col4a1P02463 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col4a1P02463 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col4a1P02463 Gm13168-201ENSMUST00000121771 632 ntBASIC24.03■■□□□ 1.44
Col4a1P02463 Gm27032-201ENSMUST00000183124 1116 ntBASIC24.03■■□□□ 1.44
Col4a1P02463 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col4a1P02463 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Col4a1P02463 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Col4a1P02463 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Col4a1P02463 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Col4a1P02463 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Col4a1P02463 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
Col4a1P02463 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col4a1P02463 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC24.02■■□□□ 1.44
Col4a1P02463 AC135637.1-201ENSMUST00000227750 365 ntBASIC24.02■■□□□ 1.44
Col4a1P02463 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col4a1P02463 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC24.02■■□□□ 1.44
Col4a1P02463 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC24.02■■□□□ 1.44
Col4a1P02463 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col4a1P02463 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col4a1P02463 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col4a1P02463 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Col4a1P02463 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Col4a1P02463 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC24.01■■□□□ 1.43
Col4a1P02463 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col4a1P02463 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Col4a1P02463 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Col4a1P02463 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms