Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.11■□□□□ 0.49
IghmP01872 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
IghmP01872 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Gm9847-201ENSMUST00000052528 599 ntBASIC18.11■□□□□ 0.49
IghmP01872 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.11■□□□□ 0.49
IghmP01872 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IghmP01872 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
IghmP01872 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 Spcs1-204ENSMUST00000226782 949 ntBASIC18.1■□□□□ 0.49
IghmP01872 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IghmP01872 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
IghmP01872 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
IghmP01872 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.09■□□□□ 0.49
IghmP01872 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.09■□□□□ 0.49
IghmP01872 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IghmP01872 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
IghmP01872 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IghmP01872 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IghmP01872 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IghmP01872 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IghmP01872 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IghmP01872 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IghmP01872 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IghmP01872 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 BC021767-201ENSMUST00000126387 1716 ntBASIC18.07■□□□□ 0.48
IghmP01872 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.07■□□□□ 0.48
IghmP01872 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
IghmP01872 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.07■□□□□ 0.48
IghmP01872 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IghmP01872 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IghmP01872 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
IghmP01872 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
IghmP01872 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
IghmP01872 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IghmP01872 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
IghmP01872 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Gm12251-201ENSMUST00000117893 792 ntBASIC18.05■□□□□ 0.48
IghmP01872 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.05■□□□□ 0.48
IghmP01872 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Gm43137-201ENSMUST00000198052 594 ntBASIC18.05■□□□□ 0.48
IghmP01872 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.05■□□□□ 0.48
IghmP01872 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IghmP01872 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.04■□□□□ 0.48
IghmP01872 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IghmP01872 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms