Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
P01852 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
P01852 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.59■□□□□ 0.41
P01852 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.59■□□□□ 0.41
P01852 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
P01852 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.59■□□□□ 0.41
P01852 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
P01852 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
P01852 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.59■□□□□ 0.41
P01852 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
P01852 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
P01852 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
P01852 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P01852 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.58■□□□□ 0.4
P01852 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.58■□□□□ 0.4
P01852 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
P01852 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
P01852 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P01852 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P01852 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.58■□□□□ 0.4
P01852 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P01852 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
P01852 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
P01852 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
P01852 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
P01852 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.57■□□□□ 0.4
P01852 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
P01852 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.57■□□□□ 0.4
P01852 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.57■□□□□ 0.4
P01852 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
P01852 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
P01852 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.57■□□□□ 0.4
P01852 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
P01852 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01852 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01852 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.56■□□□□ 0.4
P01852 Gm27801-201ENSMUST00000184174 223 ntBASIC17.56■□□□□ 0.4
P01852 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
P01852 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01852 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
P01852 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
P01852 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
P01852 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
P01852 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.55■□□□□ 0.4
P01852 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
P01852 Gm18284-201ENSMUST00000172604 624 ntBASIC17.55■□□□□ 0.4
P01852 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.55■□□□□ 0.4
P01852 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.55■□□□□ 0.4
P01852 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
P01852 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.55■□□□□ 0.4
P01852 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
P01852 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
P01852 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.54■□□□□ 0.4
P01852 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.54■□□□□ 0.4
P01852 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
P01852 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.54■□□□□ 0.4
P01852 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01852 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01852 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01852 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
P01852 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
P01852 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
P01852 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
P01852 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
P01852 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms