Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TcraP01849 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC14.05□□□□□ -0.16
TcraP01849 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TcraP01849 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TcraP01849 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TcraP01849 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.05□□□□□ -0.16
TcraP01849 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.05□□□□□ -0.16
TcraP01849 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TcraP01849 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TcraP01849 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC14.04□□□□□ -0.16
TcraP01849 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TcraP01849 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TcraP01849 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TcraP01849 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TcraP01849 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
TcraP01849 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TcraP01849 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TcraP01849 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TcraP01849 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.03□□□□□ -0.16
TcraP01849 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.03□□□□□ -0.16
TcraP01849 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TcraP01849 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TcraP01849 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TcraP01849 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
TcraP01849 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
TcraP01849 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
TcraP01849 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TcraP01849 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TcraP01849 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
TcraP01849 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TcraP01849 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TcraP01849 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TcraP01849 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Cap2-205ENSMUST00000225824 1634 ntBASIC14.01□□□□□ -0.17
TcraP01849 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TcraP01849 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TcraP01849 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.01□□□□□ -0.17
TcraP01849 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC14.01□□□□□ -0.17
TcraP01849 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
TcraP01849 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.01□□□□□ -0.17
TcraP01849 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TcraP01849 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TcraP01849 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Gm11847-201ENSMUST00000125165 1119 ntBASIC14□□□□□ -0.17
TcraP01849 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14□□□□□ -0.17
TcraP01849 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TcraP01849 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms