Protein–RNA interactions for Protein: P01653

Ig kappa chain V-V region W3082, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01653 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P01653 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01653 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
P01653 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01653 Gm13146-201ENSMUST00000118508 780 ntBASIC20.2■□□□□ 0.82
P01653 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.2■□□□□ 0.82
P01653 Gm42778-201ENSMUST00000199644 553 ntBASIC20.2■□□□□ 0.82
P01653 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
P01653 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.2■□□□□ 0.82
P01653 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01653 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
P01653 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
P01653 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
P01653 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
P01653 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.19■□□□□ 0.82
P01653 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
P01653 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
P01653 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
P01653 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.19■□□□□ 0.82
P01653 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
P01653 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.18■□□□□ 0.82
P01653 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P01653 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P01653 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
P01653 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.18■□□□□ 0.82
P01653 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.18■□□□□ 0.82
P01653 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.18■□□□□ 0.82
P01653 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
P01653 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01653 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01653 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01653 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.17■□□□□ 0.82
P01653 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.17■□□□□ 0.82
P01653 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.17■□□□□ 0.82
P01653 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01653 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.17■□□□□ 0.82
P01653 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01653 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.16■□□□□ 0.82
P01653 Gm18671-201ENSMUST00000214826 683 ntBASIC20.16■□□□□ 0.82
P01653 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
P01653 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
P01653 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
P01653 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
P01653 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P01653 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P01653 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.15■□□□□ 0.82
P01653 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P01653 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
P01653 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
P01653 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
P01653 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
P01653 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.14■□□□□ 0.81
P01653 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.14■□□□□ 0.81
P01653 AV356131-201ENSMUST00000206201 750 ntBASIC20.14■□□□□ 0.81
P01653 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
P01653 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
P01653 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
P01653 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
P01653 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
P01653 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01653 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
P01653 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01653 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01653 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
P01653 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms