Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CcnkO88874 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CcnkO88874 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CcnkO88874 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.04■□□□□ 0.32
CcnkO88874 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.04■□□□□ 0.32
CcnkO88874 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CcnkO88874 Gm22238-201ENSMUST00000175222 88 ntBASIC17.04■□□□□ 0.32
CcnkO88874 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CcnkO88874 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.04■□□□□ 0.32
CcnkO88874 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CcnkO88874 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.03■□□□□ 0.32
CcnkO88874 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
CcnkO88874 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.03■□□□□ 0.32
CcnkO88874 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.03■□□□□ 0.32
CcnkO88874 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CcnkO88874 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CcnkO88874 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CcnkO88874 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.02■□□□□ 0.32
CcnkO88874 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CcnkO88874 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CcnkO88874 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CcnkO88874 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CcnkO88874 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CcnkO88874 Gm14117-201ENSMUST00000122417 843 ntBASIC17.02■□□□□ 0.32
CcnkO88874 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.02■□□□□ 0.32
CcnkO88874 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CcnkO88874 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CcnkO88874 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CcnkO88874 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.02■□□□□ 0.31
CcnkO88874 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CcnkO88874 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CcnkO88874 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
CcnkO88874 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CcnkO88874 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.01■□□□□ 0.31
CcnkO88874 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CcnkO88874 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.01■□□□□ 0.31
CcnkO88874 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CcnkO88874 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CcnkO88874 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CcnkO88874 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CcnkO88874 Gm45606-201ENSMUST00000209836 2795 ntBASIC17■□□□□ 0.31
CcnkO88874 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CcnkO88874 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CcnkO88874 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CcnkO88874 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CcnkO88874 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
CcnkO88874 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17■□□□□ 0.31
CcnkO88874 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17■□□□□ 0.31
CcnkO88874 Gm10657-201ENSMUST00000193528 1031 ntBASIC17■□□□□ 0.31
CcnkO88874 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CcnkO88874 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17■□□□□ 0.31
CcnkO88874 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17■□□□□ 0.31
CcnkO88874 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CcnkO88874 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CcnkO88874 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CcnkO88874 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17■□□□□ 0.31
CcnkO88874 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CcnkO88874 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CcnkO88874 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CcnkO88874 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CcnkO88874 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CcnkO88874 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.99■□□□□ 0.31
CcnkO88874 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CcnkO88874 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CcnkO88874 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.99■□□□□ 0.31
CcnkO88874 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.99■□□□□ 0.31
CcnkO88874 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.99■□□□□ 0.31
CcnkO88874 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.99■□□□□ 0.31
CcnkO88874 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.99■□□□□ 0.31
CcnkO88874 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CcnkO88874 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms