Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Becn1O88597 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.99■■□□□ 1.11
Becn1O88597 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Becn1O88597 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Becn1O88597 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Becn1O88597 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Becn1O88597 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Becn1O88597 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
Becn1O88597 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Becn1O88597 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Becn1O88597 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.98■■□□□ 1.11
Becn1O88597 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Becn1O88597 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Becn1O88597 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Becn1O88597 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.97■■□□□ 1.11
Becn1O88597 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Becn1O88597 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Becn1O88597 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Becn1O88597 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Becn1O88597 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.97■■□□□ 1.11
Becn1O88597 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Becn1O88597 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Becn1O88597 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.96■■□□□ 1.11
Becn1O88597 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Becn1O88597 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.96■■□□□ 1.11
Becn1O88597 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Becn1O88597 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Becn1O88597 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Becn1O88597 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.96■■□□□ 1.11
Becn1O88597 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Becn1O88597 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Becn1O88597 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Becn1O88597 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Becn1O88597 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Becn1O88597 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Becn1O88597 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Becn1O88597 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.95■■□□□ 1.1
Becn1O88597 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Becn1O88597 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Becn1O88597 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Becn1O88597 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Becn1O88597 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Becn1O88597 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
Becn1O88597 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Becn1O88597 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Becn1O88597 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Becn1O88597 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Becn1O88597 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.93■■□□□ 1.1
Becn1O88597 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Becn1O88597 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC21.92■■□□□ 1.1
Becn1O88597 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Becn1O88597 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Becn1O88597 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.92■■□□□ 1.1
Becn1O88597 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Becn1O88597 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC21.92■■□□□ 1.1
Becn1O88597 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Becn1O88597 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Becn1O88597 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Becn1O88597 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.91■■□□□ 1.1
Becn1O88597 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.91■■□□□ 1.1
Becn1O88597 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Becn1O88597 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Becn1O88597 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.9■■□□□ 1.1
Becn1O88597 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.9■■□□□ 1.1
Becn1O88597 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Becn1O88597 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Becn1O88597 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Becn1O88597 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Becn1O88597 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Becn1O88597 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Becn1O88597 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms