Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1hO88427 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1hO88427 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1hO88427 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.01■□□□□ 0.63
Cacna1hO88427 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Cacna1hO88427 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Cacna1hO88427 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Cacna1hO88427 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1hO88427 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Cacna1hO88427 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1hO88427 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cacna1hO88427 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1hO88427 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1hO88427 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1hO88427 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1hO88427 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cacna1hO88427 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
Cacna1hO88427 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1hO88427 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.98■□□□□ 0.63
Cacna1hO88427 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cacna1hO88427 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1hO88427 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1hO88427 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1hO88427 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1hO88427 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.98■□□□□ 0.63
Cacna1hO88427 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.98■□□□□ 0.63
Cacna1hO88427 Gm13158-201ENSMUST00000122007 736 ntBASIC18.98■□□□□ 0.63
Cacna1hO88427 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1hO88427 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cacna1hO88427 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1hO88427 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1hO88427 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1hO88427 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1hO88427 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1hO88427 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1hO88427 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1hO88427 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1hO88427 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1hO88427 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.96■□□□□ 0.63
Cacna1hO88427 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1hO88427 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1hO88427 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cacna1hO88427 Gm2399-201ENSMUST00000104944 225 ntBASIC18.96■□□□□ 0.63
Cacna1hO88427 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1hO88427 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.96■□□□□ 0.63
Cacna1hO88427 Gm44549-201ENSMUST00000208351 577 ntBASIC18.96■□□□□ 0.63
Cacna1hO88427 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cacna1hO88427 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1hO88427 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1hO88427 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
Cacna1hO88427 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1hO88427 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1hO88427 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1hO88427 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.95■□□□□ 0.62
Cacna1hO88427 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Cacna1hO88427 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1hO88427 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.95■□□□□ 0.62
Cacna1hO88427 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1hO88427 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1hO88427 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cacna1hO88427 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cacna1hO88427 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1hO88427 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1hO88427 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1hO88427 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1hO88427 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1hO88427 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cacna1hO88427 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1hO88427 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1hO88427 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.94■□□□□ 0.62
Cacna1hO88427 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cacna1hO88427 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cacna1hO88427 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1hO88427 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
Cacna1hO88427 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1hO88427 Gm23634-201ENSMUST00000175071 91 ntBASIC18.93■□□□□ 0.62
Cacna1hO88427 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1hO88427 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1hO88427 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1hO88427 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1hO88427 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cacna1hO88427 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1hO88427 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Cacna1hO88427 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cacna1hO88427 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1hO88427 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1hO88427 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1hO88427 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1hO88427 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cacna1hO88427 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cacna1hO88427 Gm7889-201ENSMUST00000185591 958 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms