Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col5a1O88207 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col5a1O88207 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col5a1O88207 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Col5a1O88207 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.65■□□□□ 0.42
Col5a1O88207 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Col5a1O88207 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.65■□□□□ 0.42
Col5a1O88207 Gm38205-201ENSMUST00000192243 258 ntBASIC17.65■□□□□ 0.42
Col5a1O88207 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.65■□□□□ 0.42
Col5a1O88207 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.65■□□□□ 0.42
Col5a1O88207 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col5a1O88207 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.64■□□□□ 0.41
Col5a1O88207 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col5a1O88207 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
Col5a1O88207 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.63■□□□□ 0.41
Col5a1O88207 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col5a1O88207 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col5a1O88207 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.62■□□□□ 0.41
Col5a1O88207 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.62■□□□□ 0.41
Col5a1O88207 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col5a1O88207 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col5a1O88207 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col5a1O88207 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col5a1O88207 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Gm6365-201ENSMUST00000054711 744 ntBASIC17.61■□□□□ 0.41
Col5a1O88207 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col5a1O88207 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col5a1O88207 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col5a1O88207 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col5a1O88207 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.6■□□□□ 0.41
Col5a1O88207 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col5a1O88207 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col5a1O88207 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Col5a1O88207 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col5a1O88207 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.6■□□□□ 0.41
Col5a1O88207 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col5a1O88207 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col5a1O88207 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col5a1O88207 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col5a1O88207 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col5a1O88207 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.59■□□□□ 0.41
Col5a1O88207 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col5a1O88207 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col5a1O88207 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col5a1O88207 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col5a1O88207 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Col5a1O88207 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.58■□□□□ 0.41
Col5a1O88207 Gm13534-201ENSMUST00000121169 513 ntBASIC17.58■□□□□ 0.41
Col5a1O88207 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col5a1O88207 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col5a1O88207 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col5a1O88207 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col5a1O88207 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col5a1O88207 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col5a1O88207 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Col5a1O88207 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col5a1O88207 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col5a1O88207 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col5a1O88207 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col5a1O88207 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col5a1O88207 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col5a1O88207 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a1O88207 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.57■□□□□ 0.4
Col5a1O88207 Gm27275-201ENSMUST00000184318 272 ntBASIC17.57■□□□□ 0.4
Col5a1O88207 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.57■□□□□ 0.4
Col5a1O88207 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a1O88207 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col5a1O88207 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms