Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.47■□□□□ 0.39
Pdlim3O70209 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pdlim3O70209 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.46■□□□□ 0.39
Pdlim3O70209 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pdlim3O70209 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pdlim3O70209 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Pdlim3O70209 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pdlim3O70209 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Pdlim3O70209 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pdlim3O70209 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.45■□□□□ 0.38
Pdlim3O70209 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.45■□□□□ 0.38
Pdlim3O70209 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.45■□□□□ 0.38
Pdlim3O70209 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.45■□□□□ 0.38
Pdlim3O70209 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.45■□□□□ 0.38
Pdlim3O70209 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pdlim3O70209 BC021767-201ENSMUST00000126387 1716 ntBASIC17.44■□□□□ 0.38
Pdlim3O70209 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.44■□□□□ 0.38
Pdlim3O70209 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.44■□□□□ 0.38
Pdlim3O70209 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim3O70209 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.44■□□□□ 0.38
Pdlim3O70209 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim3O70209 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim3O70209 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim3O70209 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim3O70209 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim3O70209 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdlim3O70209 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim3O70209 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.43■□□□□ 0.38
Pdlim3O70209 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim3O70209 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdlim3O70209 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim3O70209 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.42■□□□□ 0.38
Pdlim3O70209 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pdlim3O70209 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pdlim3O70209 Gm7417-201ENSMUST00000192950 473 ntBASIC17.41■□□□□ 0.38
Pdlim3O70209 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim3O70209 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pdlim3O70209 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdlim3O70209 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Pdlim3O70209 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
Pdlim3O70209 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.4■□□□□ 0.38
Pdlim3O70209 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim3O70209 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Pdlim3O70209 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pdlim3O70209 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.39■□□□□ 0.37
Pdlim3O70209 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim3O70209 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms