Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Alx3O70137 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Alx3O70137 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Alx3O70137 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Alx3O70137 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Alx3O70137 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx3O70137 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Alx3O70137 AA386476-201ENSMUST00000098781 1665 ntBASIC17.44■□□□□ 0.38
Alx3O70137 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx3O70137 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Alx3O70137 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Alx3O70137 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.43■□□□□ 0.38
Alx3O70137 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Alx3O70137 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.42■□□□□ 0.38
Alx3O70137 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Alx3O70137 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Alx3O70137 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.41■□□□□ 0.38
Alx3O70137 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.41■□□□□ 0.38
Alx3O70137 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Alx3O70137 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Alx3O70137 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
Alx3O70137 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.41■□□□□ 0.38
Alx3O70137 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.41■□□□□ 0.38
Alx3O70137 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Alx3O70137 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Alx3O70137 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Alx3O70137 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.4■□□□□ 0.38
Alx3O70137 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Alx3O70137 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Alx3O70137 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Alx3O70137 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Alx3O70137 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.4■□□□□ 0.38
Alx3O70137 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Alx3O70137 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Alx3O70137 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.4■□□□□ 0.38
Alx3O70137 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Alx3O70137 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Alx3O70137 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.39■□□□□ 0.38
Alx3O70137 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Alx3O70137 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Alx3O70137 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alx3O70137 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alx3O70137 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alx3O70137 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Alx3O70137 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.38■□□□□ 0.37
Alx3O70137 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Alx3O70137 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.38■□□□□ 0.37
Alx3O70137 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alx3O70137 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Alx3O70137 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Alx3O70137 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.38■□□□□ 0.37
Alx3O70137 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Alx3O70137 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.38■□□□□ 0.37
Alx3O70137 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Alx3O70137 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.38■□□□□ 0.37
Alx3O70137 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Alx3O70137 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms