Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ldb2O55203 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb2O55203 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.21■□□□□ 0.67
Ldb2O55203 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.21■□□□□ 0.67
Ldb2O55203 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ldb2O55203 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.21■□□□□ 0.67
Ldb2O55203 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb2O55203 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ldb2O55203 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.21■□□□□ 0.67
Ldb2O55203 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb2O55203 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ldb2O55203 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb2O55203 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ldb2O55203 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb2O55203 Gm40848-201ENSMUST00000221998 324 ntBASIC19.2■□□□□ 0.66
Ldb2O55203 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb2O55203 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb2O55203 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb2O55203 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ldb2O55203 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Ldb2O55203 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb2O55203 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb2O55203 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ldb2O55203 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.19■□□□□ 0.66
Ldb2O55203 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.19■□□□□ 0.66
Ldb2O55203 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb2O55203 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb2O55203 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ldb2O55203 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb2O55203 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb2O55203 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ldb2O55203 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ldb2O55203 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ldb2O55203 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ldb2O55203 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ldb2O55203 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ldb2O55203 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ldb2O55203 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Ldb2O55203 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ldb2O55203 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ldb2O55203 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ldb2O55203 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.18■□□□□ 0.66
Ldb2O55203 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.17■□□□□ 0.66
Ldb2O55203 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.17■□□□□ 0.66
Ldb2O55203 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ldb2O55203 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Ldb2O55203 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.17■□□□□ 0.66
Ldb2O55203 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Ldb2O55203 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ldb2O55203 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ldb2O55203 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ldb2O55203 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.16■□□□□ 0.66
Ldb2O55203 Gm27801-201ENSMUST00000184174 223 ntBASIC19.16■□□□□ 0.66
Ldb2O55203 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ldb2O55203 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ldb2O55203 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.15■□□□□ 0.66
Ldb2O55203 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ldb2O55203 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ldb2O55203 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ldb2O55203 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ldb2O55203 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ldb2O55203 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ldb2O55203 Iqck-206ENSMUST00000208658 2891 ntBASIC19.14■□□□□ 0.65
Ldb2O55203 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ldb2O55203 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.14■□□□□ 0.65
Ldb2O55203 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.14■□□□□ 0.65
Ldb2O55203 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ldb2O55203 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ldb2O55203 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.14■□□□□ 0.65
Ldb2O55203 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ldb2O55203 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ldb2O55203 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
Ldb2O55203 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ldb2O55203 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ldb2O55203 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
Ldb2O55203 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Ldb2O55203 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ldb2O55203 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ldb2O55203 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ldb2O55203 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Ldb2O55203 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ldb2O55203 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ldb2O55203 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms