Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
Pja1O55176 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.38■□□□□ 0.85
Pja1O55176 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Pja1O55176 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pja1O55176 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Pja1O55176 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pja1O55176 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.37■□□□□ 0.85
Pja1O55176 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.37■□□□□ 0.85
Pja1O55176 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pja1O55176 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pja1O55176 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pja1O55176 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pja1O55176 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.36■□□□□ 0.85
Pja1O55176 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.36■□□□□ 0.85
Pja1O55176 Serp2-204ENSMUST00000228055 705 ntBASIC20.36■□□□□ 0.85
Pja1O55176 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pja1O55176 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pja1O55176 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pja1O55176 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pja1O55176 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pja1O55176 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pja1O55176 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.35■□□□□ 0.85
Pja1O55176 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.35■□□□□ 0.85
Pja1O55176 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.35■□□□□ 0.85
Pja1O55176 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pja1O55176 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.35■□□□□ 0.85
Pja1O55176 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pja1O55176 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pja1O55176 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pja1O55176 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pja1O55176 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pja1O55176 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pja1O55176 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.34■□□□□ 0.85
Pja1O55176 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pja1O55176 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Pja1O55176 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pja1O55176 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pja1O55176 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pja1O55176 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pja1O55176 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pja1O55176 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pja1O55176 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pja1O55176 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Pja1O55176 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Pja1O55176 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pja1O55176 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pja1O55176 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.32■□□□□ 0.84
Pja1O55176 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.32■□□□□ 0.84
Pja1O55176 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pja1O55176 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.32■□□□□ 0.84
Pja1O55176 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pja1O55176 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pja1O55176 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.31■□□□□ 0.84
Pja1O55176 Gm45102-201ENSMUST00000207427 857 ntBASIC20.31■□□□□ 0.84
Pja1O55176 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pja1O55176 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.31■□□□□ 0.84
Pja1O55176 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pja1O55176 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pja1O55176 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pja1O55176 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pja1O55176 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pja1O55176 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.29■□□□□ 0.84
Pja1O55176 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.29■□□□□ 0.84
Pja1O55176 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pja1O55176 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pja1O55176 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pja1O55176 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms