Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Prom1O54990 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prom1O54990 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.4■■□□□ 1.02
Prom1O54990 Gm7290-201ENSMUST00000104990 617 ntBASIC21.4■■□□□ 1.02
Prom1O54990 Gm12918-201ENSMUST00000120234 636 ntBASIC21.4■■□□□ 1.02
Prom1O54990 Gm15710-201ENSMUST00000121821 636 ntBASIC21.4■■□□□ 1.02
Prom1O54990 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Prom1O54990 Gm5075-201ENSMUST00000196916 622 ntBASIC21.4■■□□□ 1.02
Prom1O54990 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.4■■□□□ 1.02
Prom1O54990 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.4■■□□□ 1.02
Prom1O54990 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.4■■□□□ 1.02
Prom1O54990 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Prom1O54990 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Prom1O54990 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Prom1O54990 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Prom1O54990 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Prom1O54990 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Prom1O54990 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
Prom1O54990 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Prom1O54990 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Prom1O54990 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prom1O54990 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prom1O54990 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prom1O54990 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Prom1O54990 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Prom1O54990 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.38■■□□□ 1.01
Prom1O54990 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.38■■□□□ 1.01
Prom1O54990 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Prom1O54990 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Prom1O54990 Gm20049-201ENSMUST00000219950 730 ntBASIC21.38■■□□□ 1.01
Prom1O54990 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Prom1O54990 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Prom1O54990 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.37■■□□□ 1.01
Prom1O54990 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prom1O54990 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prom1O54990 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prom1O54990 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prom1O54990 Gm22240-201ENSMUST00000175225 82 ntBASIC21.37■■□□□ 1.01
Prom1O54990 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.37■■□□□ 1.01
Prom1O54990 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.37■■□□□ 1.01
Prom1O54990 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.37■■□□□ 1.01
Prom1O54990 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prom1O54990 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prom1O54990 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Prom1O54990 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Prom1O54990 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Prom1O54990 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prom1O54990 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Prom1O54990 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.35■■□□□ 1.01
Prom1O54990 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Prom1O54990 Gm20760-201ENSMUST00000179197 648 ntBASIC21.35■■□□□ 1.01
Prom1O54990 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Prom1O54990 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.35■■□□□ 1.01
Prom1O54990 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Prom1O54990 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Prom1O54990 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prom1O54990 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prom1O54990 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prom1O54990 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prom1O54990 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Prom1O54990 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Prom1O54990 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Prom1O54990 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Prom1O54990 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.33■■□□□ 1.01
Prom1O54990 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Prom1O54990 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prom1O54990 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Prom1O54990 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Prom1O54990 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Prom1O54990 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.33■■□□□ 1
Prom1O54990 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prom1O54990 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.32■■□□□ 1
Prom1O54990 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.32■■□□□ 1
Prom1O54990 Gm37856-201ENSMUST00000191634 999 ntBASIC21.32■■□□□ 1
Prom1O54990 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.32■■□□□ 1
Prom1O54990 Gm10252-201ENSMUST00000209541 832 ntBASIC21.32■■□□□ 1
Prom1O54990 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.32■■□□□ 1
Prom1O54990 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prom1O54990 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Prom1O54990 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prom1O54990 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Prom1O54990 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Prom1O54990 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms