Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.1■□□□□ 0.81
Cldn5O54942 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn5O54942 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cldn5O54942 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cldn5O54942 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cldn5O54942 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cldn5O54942 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn5O54942 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Cldn5O54942 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Cldn5O54942 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.08■□□□□ 0.81
Cldn5O54942 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Cldn5O54942 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.08■□□□□ 0.81
Cldn5O54942 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cldn5O54942 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.08■□□□□ 0.81
Cldn5O54942 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.08■□□□□ 0.81
Cldn5O54942 Gm37179-201ENSMUST00000194862 823 ntBASIC20.08■□□□□ 0.81
Cldn5O54942 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.08■□□□□ 0.81
Cldn5O54942 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn5O54942 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn5O54942 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn5O54942 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn5O54942 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn5O54942 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn5O54942 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cldn5O54942 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn5O54942 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn5O54942 Gm29257-201ENSMUST00000186115 639 ntBASIC20.07■□□□□ 0.8
Cldn5O54942 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.07■□□□□ 0.8
Cldn5O54942 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.07■□□□□ 0.8
Cldn5O54942 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.07■□□□□ 0.8
Cldn5O54942 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn5O54942 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn5O54942 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.06■□□□□ 0.8
Cldn5O54942 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn5O54942 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn5O54942 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn5O54942 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.06■□□□□ 0.8
Cldn5O54942 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn5O54942 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn5O54942 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn5O54942 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn5O54942 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn5O54942 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn5O54942 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn5O54942 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn5O54942 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Cldn5O54942 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.04■□□□□ 0.8
Cldn5O54942 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.04■□□□□ 0.8
Cldn5O54942 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Cldn5O54942 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn5O54942 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn5O54942 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cldn5O54942 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cldn5O54942 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cldn5O54942 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.03■□□□□ 0.8
Cldn5O54942 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.03■□□□□ 0.8
Cldn5O54942 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn5O54942 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn5O54942 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cldn5O54942 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn5O54942 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.03■□□□□ 0.8
Cldn5O54942 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn5O54942 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.02■□□□□ 0.8
Cldn5O54942 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.02■□□□□ 0.8
Cldn5O54942 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn5O54942 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn5O54942 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms