Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clk4O35493 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.42■□□□□ 0.54
Clk4O35493 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.42■□□□□ 0.54
Clk4O35493 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.42■□□□□ 0.54
Clk4O35493 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.42■□□□□ 0.54
Clk4O35493 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.42■□□□□ 0.54
Clk4O35493 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Clk4O35493 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.42■□□□□ 0.54
Clk4O35493 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clk4O35493 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Clk4O35493 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Clk4O35493 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clk4O35493 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clk4O35493 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Clk4O35493 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clk4O35493 Gm11421-201ENSMUST00000122124 294 ntBASIC18.41■□□□□ 0.54
Clk4O35493 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clk4O35493 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.41■□□□□ 0.54
Clk4O35493 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.41■□□□□ 0.54
Clk4O35493 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clk4O35493 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Clk4O35493 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Clk4O35493 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Clk4O35493 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
Clk4O35493 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.41■□□□□ 0.54
Clk4O35493 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Clk4O35493 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Clk4O35493 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.41■□□□□ 0.54
Clk4O35493 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Clk4O35493 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clk4O35493 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clk4O35493 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Clk4O35493 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clk4O35493 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.4■□□□□ 0.54
Clk4O35493 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.4■□□□□ 0.54
Clk4O35493 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.4■□□□□ 0.54
Clk4O35493 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Clk4O35493 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.4■□□□□ 0.54
Clk4O35493 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.4■□□□□ 0.54
Clk4O35493 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Clk4O35493 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.4■□□□□ 0.54
Clk4O35493 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clk4O35493 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Clk4O35493 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clk4O35493 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Clk4O35493 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Clk4O35493 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.39■□□□□ 0.53
Clk4O35493 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Clk4O35493 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.39■□□□□ 0.53
Clk4O35493 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.39■□□□□ 0.53
Clk4O35493 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Clk4O35493 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Clk4O35493 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 AA386476-201ENSMUST00000098781 1665 ntBASIC18.38■□□□□ 0.53
Clk4O35493 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.38■□□□□ 0.53
Clk4O35493 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Clk4O35493 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Clk4O35493 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.38■□□□□ 0.53
Clk4O35493 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Clk4O35493 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Clk4O35493 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clk4O35493 Gm43060-201ENSMUST00000200621 289 ntBASIC18.37■□□□□ 0.53
Clk4O35493 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.37■□□□□ 0.53
Clk4O35493 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clk4O35493 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Clk4O35493 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Clk4O35493 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.36■□□□□ 0.53
Clk4O35493 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
Clk4O35493 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clk4O35493 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Clk4O35493 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clk4O35493 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clk4O35493 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms