Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clk2O35491 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clk2O35491 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clk2O35491 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Clk2O35491 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Clk2O35491 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk2O35491 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk2O35491 Gm13534-201ENSMUST00000121169 513 ntBASIC21.06■□□□□ 0.96
Clk2O35491 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Clk2O35491 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk2O35491 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.06■□□□□ 0.96
Clk2O35491 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk2O35491 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.06■□□□□ 0.96
Clk2O35491 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clk2O35491 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk2O35491 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk2O35491 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Clk2O35491 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk2O35491 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk2O35491 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Clk2O35491 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk2O35491 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Clk2O35491 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk2O35491 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Clk2O35491 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Clk2O35491 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.05■□□□□ 0.96
Clk2O35491 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clk2O35491 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Clk2O35491 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Clk2O35491 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clk2O35491 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk2O35491 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk2O35491 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Clk2O35491 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.04■□□□□ 0.96
Clk2O35491 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Clk2O35491 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk2O35491 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.04■□□□□ 0.96
Clk2O35491 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clk2O35491 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.04■□□□□ 0.96
Clk2O35491 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clk2O35491 Gm12933-201ENSMUST00000120203 872 ntBASIC21.03■□□□□ 0.96
Clk2O35491 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Clk2O35491 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Clk2O35491 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clk2O35491 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk2O35491 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Clk2O35491 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Clk2O35491 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.02■□□□□ 0.96
Clk2O35491 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clk2O35491 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.02■□□□□ 0.96
Clk2O35491 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.02■□□□□ 0.96
Clk2O35491 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Clk2O35491 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk2O35491 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clk2O35491 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clk2O35491 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Clk2O35491 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Clk2O35491 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Clk2O35491 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC21.01■□□□□ 0.95
Clk2O35491 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Clk2O35491 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Clk2O35491 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clk2O35491 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21■□□□□ 0.95
Clk2O35491 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Clk2O35491 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21■□□□□ 0.95
Clk2O35491 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21■□□□□ 0.95
Clk2O35491 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Clk2O35491 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clk2O35491 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.99■□□□□ 0.95
Clk2O35491 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Clk2O35491 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.99■□□□□ 0.95
Clk2O35491 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clk2O35491 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk2O35491 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Clk2O35491 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms