Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Polr2jO08740 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.47■□□□□ 0.55
Polr2jO08740 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.47■□□□□ 0.55
Polr2jO08740 Gm15546-201ENSMUST00000122095 826 ntBASIC18.47■□□□□ 0.55
Polr2jO08740 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.47■□□□□ 0.55
Polr2jO08740 Gm22238-201ENSMUST00000175222 88 ntBASIC18.47■□□□□ 0.55
Polr2jO08740 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.47■□□□□ 0.55
Polr2jO08740 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.47■□□□□ 0.55
Polr2jO08740 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Polr2jO08740 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Polr2jO08740 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.46■□□□□ 0.55
Polr2jO08740 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2jO08740 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2jO08740 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2jO08740 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Polr2jO08740 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Polr2jO08740 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Polr2jO08740 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2jO08740 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Polr2jO08740 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2jO08740 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2jO08740 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Polr2jO08740 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Polr2jO08740 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.46■□□□□ 0.54
Polr2jO08740 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.45■□□□□ 0.54
Polr2jO08740 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.45■□□□□ 0.54
Polr2jO08740 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.45■□□□□ 0.54
Polr2jO08740 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.45■□□□□ 0.54
Polr2jO08740 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Polr2jO08740 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Polr2jO08740 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.44■□□□□ 0.54
Polr2jO08740 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Polr2jO08740 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Polr2jO08740 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Polr2jO08740 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Polr2jO08740 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Polr2jO08740 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Polr2jO08740 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Polr2jO08740 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Polr2jO08740 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Polr2jO08740 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Polr2jO08740 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.43■□□□□ 0.54
Polr2jO08740 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Polr2jO08740 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Polr2jO08740 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr2jO08740 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr2jO08740 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Polr2jO08740 Gm9959-201ENSMUST00000068277 390 ntBASIC18.42■□□□□ 0.54
Polr2jO08740 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Polr2jO08740 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Polr2jO08740 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Polr2jO08740 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Polr2jO08740 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.41■□□□□ 0.54
Polr2jO08740 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 BC021767-201ENSMUST00000126387 1716 ntBASIC18.41■□□□□ 0.54
Polr2jO08740 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Polr2jO08740 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Polr2jO08740 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Polr2jO08740 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.4■□□□□ 0.54
Polr2jO08740 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Polr2jO08740 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Polr2jO08740 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Polr2jO08740 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Polr2jO08740 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Polr2jO08740 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms