Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Tnfrsf11bO08712 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Tnfrsf11bO08712 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.54■□□□□ 0.72
Tnfrsf11bO08712 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Golph3-205ENSMUST00000228671 2842 ntBASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Tnfrsf11bO08712 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Gm43137-201ENSMUST00000198052 594 ntBASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Spcs1-204ENSMUST00000226782 949 ntBASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Tnfrsf11bO08712 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.52■□□□□ 0.71
Tnfrsf11bO08712 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfrsf11bO08712 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Tnfrsf11bO08712 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Tnfrsf11bO08712 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.5■□□□□ 0.71
Tnfrsf11bO08712 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Tnfrsf11bO08712 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms