Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sh3yl1O08641 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3yl1O08641 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.33■□□□□ 0.52
Sh3yl1O08641 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sh3yl1O08641 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.33■□□□□ 0.52
Sh3yl1O08641 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.33■□□□□ 0.52
Sh3yl1O08641 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3yl1O08641 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3yl1O08641 Gm26833-201ENSMUST00000180899 440 ntBASIC18.32■□□□□ 0.52
Sh3yl1O08641 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.32■□□□□ 0.52
Sh3yl1O08641 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3yl1O08641 Gm40848-201ENSMUST00000221998 324 ntBASIC18.32■□□□□ 0.52
Sh3yl1O08641 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Sh3yl1O08641 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3yl1O08641 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sh3yl1O08641 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sh3yl1O08641 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Smad6-203ENSMUST00000179458 273 ntBASIC18.3■□□□□ 0.52
Sh3yl1O08641 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sh3yl1O08641 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3yl1O08641 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3yl1O08641 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3yl1O08641 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sh3yl1O08641 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.29■□□□□ 0.52
Sh3yl1O08641 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.28■□□□□ 0.52
Sh3yl1O08641 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sh3yl1O08641 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
Sh3yl1O08641 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3yl1O08641 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3yl1O08641 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3yl1O08641 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.27■□□□□ 0.51
Sh3yl1O08641 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Sh3yl1O08641 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.26■□□□□ 0.51
Sh3yl1O08641 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3yl1O08641 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sh3yl1O08641 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sh3yl1O08641 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3yl1O08641 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3yl1O08641 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Sh3yl1O08641 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3yl1O08641 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Sh3yl1O08641 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3yl1O08641 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms