Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Raet1cO08604 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raet1cO08604 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Raet1cO08604 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.18■□□□□ 0.34
Raet1cO08604 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.18■□□□□ 0.34
Raet1cO08604 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Raet1cO08604 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Raet1cO08604 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Raet1cO08604 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.17■□□□□ 0.34
Raet1cO08604 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.17■□□□□ 0.34
Raet1cO08604 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Raet1cO08604 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Raet1cO08604 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Raet1cO08604 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Raet1cO08604 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Raet1cO08604 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Gm8493-201ENSMUST00000196881 489 ntBASIC17.16■□□□□ 0.34
Raet1cO08604 Gm45417-201ENSMUST00000209533 758 ntBASIC17.16■□□□□ 0.34
Raet1cO08604 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.16■□□□□ 0.34
Raet1cO08604 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.16■□□□□ 0.34
Raet1cO08604 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Raet1cO08604 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.15■□□□□ 0.34
Raet1cO08604 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1cO08604 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1cO08604 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.15■□□□□ 0.34
Raet1cO08604 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1cO08604 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1cO08604 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.15■□□□□ 0.34
Raet1cO08604 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1cO08604 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Raet1cO08604 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.14■□□□□ 0.33
Raet1cO08604 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Raet1cO08604 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Raet1cO08604 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Raet1cO08604 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Raet1cO08604 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1cO08604 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1cO08604 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1cO08604 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1cO08604 Gm43173-201ENSMUST00000202246 593 ntBASIC17.13■□□□□ 0.33
Raet1cO08604 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1cO08604 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1cO08604 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Raet1cO08604 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.12■□□□□ 0.33
Raet1cO08604 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Raet1cO08604 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms