Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
B020004C17RikJ3QP07 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.78■■□□□ 1.08
B020004C17RikJ3QP07 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.78■■□□□ 1.08
B020004C17RikJ3QP07 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
B020004C17RikJ3QP07 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
B020004C17RikJ3QP07 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
B020004C17RikJ3QP07 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.78■■□□□ 1.08
B020004C17RikJ3QP07 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
B020004C17RikJ3QP07 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
B020004C17RikJ3QP07 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
B020004C17RikJ3QP07 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.75■■□□□ 1.07
B020004C17RikJ3QP07 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.75■■□□□ 1.07
B020004C17RikJ3QP07 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.75■■□□□ 1.07
B020004C17RikJ3QP07 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.75■■□□□ 1.07
B020004C17RikJ3QP07 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
B020004C17RikJ3QP07 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
B020004C17RikJ3QP07 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
B020004C17RikJ3QP07 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
B020004C17RikJ3QP07 Mir7071-201ENSMUST00000184847 69 ntBASIC21.74■■□□□ 1.07
B020004C17RikJ3QP07 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
B020004C17RikJ3QP07 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.74■■□□□ 1.07
B020004C17RikJ3QP07 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
B020004C17RikJ3QP07 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
B020004C17RikJ3QP07 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
B020004C17RikJ3QP07 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
B020004C17RikJ3QP07 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
B020004C17RikJ3QP07 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.73■■□□□ 1.07
B020004C17RikJ3QP07 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
B020004C17RikJ3QP07 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
B020004C17RikJ3QP07 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Gm12896-201ENSMUST00000118430 226 ntBASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Gm27275-201ENSMUST00000184318 272 ntBASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
B020004C17RikJ3QP07 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
B020004C17RikJ3QP07 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
B020004C17RikJ3QP07 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
B020004C17RikJ3QP07 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 Gm5643-201ENSMUST00000117081 966 ntBASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
B020004C17RikJ3QP07 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
B020004C17RikJ3QP07 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Mir6982-201ENSMUST00000184354 68 ntBASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Gm2559-201ENSMUST00000201323 363 ntBASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
B020004C17RikJ3QP07 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms