Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Trim34bJ3QNR8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.66■■□□□ 1.38
Trim34bJ3QNR8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Trim34bJ3QNR8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trim34bJ3QNR8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Trim34bJ3QNR8 Nespas-201ENSMUST00000143738 1083 ntBASIC23.66■■□□□ 1.38
Trim34bJ3QNR8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34bJ3QNR8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim34bJ3QNR8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Gm6365-201ENSMUST00000054711 744 ntBASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim34bJ3QNR8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim34bJ3QNR8 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim34bJ3QNR8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim34bJ3QNR8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim34bJ3QNR8 Gm7290-201ENSMUST00000104990 617 ntBASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Gm12918-201ENSMUST00000120234 636 ntBASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Gm15710-201ENSMUST00000121821 636 ntBASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Gm5075-201ENSMUST00000196916 622 ntBASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Trim34bJ3QNR8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Trim34bJ3QNR8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Trim34bJ3QNR8 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim34bJ3QNR8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim34bJ3QNR8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Trim34bJ3QNR8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Gm3807-201ENSMUST00000193520 1168 ntBASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.61■■□□□ 1.37
Trim34bJ3QNR8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Gm12441-201ENSMUST00000121806 588 ntBASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
Trim34bJ3QNR8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Trim34bJ3QNR8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Trim34bJ3QNR8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trim34bJ3QNR8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms