Protein–RNA interactions for Protein: J3QM76

Ccdc179, Coiled-coil domain-containing protein 179, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc179J3QM76 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc179J3QM76 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc179J3QM76 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ccdc179J3QM76 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.21□□□□□ -0.45
Ccdc179J3QM76 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Gm9847-201ENSMUST00000052528 599 ntBASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ccdc179J3QM76 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc179J3QM76 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc179J3QM76 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc179J3QM76 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc179J3QM76 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc179J3QM76 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ccdc179J3QM76 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ccdc179J3QM76 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Golgb1-201ENSMUST00000023534 498 ntBASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 AC152827.1-201ENSMUST00000221143 2189 ntBASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ccdc179J3QM76 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Gm13241-201ENSMUST00000094493 780 ntBASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ccdc179J3QM76 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ccdc179J3QM76 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ccdc179J3QM76 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms