Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh11xF6ZNL5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh11xF6ZNL5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh11xF6ZNL5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh11xF6ZNL5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh11xF6ZNL5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pcdh11xF6ZNL5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Pcdh11xF6ZNL5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh11xF6ZNL5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Smad6-203ENSMUST00000179458 273 ntBASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Gm8495-201ENSMUST00000188740 694 ntBASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh11xF6ZNL5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Gm18284-201ENSMUST00000172604 624 ntBASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdh11xF6ZNL5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh11xF6ZNL5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh11xF6ZNL5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh11xF6ZNL5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh11xF6ZNL5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh11xF6ZNL5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh11xF6ZNL5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh11xF6ZNL5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdh11xF6ZNL5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdh11xF6ZNL5 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh11xF6ZNL5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh11xF6ZNL5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh11xF6ZNL5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Pcdh11xF6ZNL5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh11xF6ZNL5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Gm11421-201ENSMUST00000122124 294 ntBASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdh11xF6ZNL5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh11xF6ZNL5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms