Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.37■□□□□ 0.21
Cpsf4lE9Q2N0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpsf4lE9Q2N0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpsf4lE9Q2N0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4lE9Q2N0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.34■□□□□ 0.21
Cpsf4lE9Q2N0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4lE9Q2N0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4lE9Q2N0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpsf4lE9Q2N0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4lE9Q2N0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4lE9Q2N0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Cpsf4lE9Q2N0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cpsf4lE9Q2N0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpsf4lE9Q2N0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4lE9Q2N0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4lE9Q2N0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpsf4lE9Q2N0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpsf4lE9Q2N0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4lE9Q2N0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpsf4lE9Q2N0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms