Protein–RNA interactions for Protein: D3Z6R0

Gm5478, Predicted pseudogene 5478, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5478D3Z6R0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5478D3Z6R0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm5478D3Z6R0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm5478D3Z6R0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm5478D3Z6R0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm5478D3Z6R0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm5478D3Z6R0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm5478D3Z6R0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm5478D3Z6R0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm5478D3Z6R0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm5478D3Z6R0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms