Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3543D3Z235 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.39■□□□□ 0.37
Gm3543D3Z235 Gm40848-201ENSMUST00000221998 324 ntBASIC17.39■□□□□ 0.37
Gm3543D3Z235 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3543D3Z235 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3543D3Z235 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Gm3543D3Z235 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm3543D3Z235 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.37■□□□□ 0.37
Gm3543D3Z235 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.37■□□□□ 0.37
Gm3543D3Z235 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Gm5874-201ENSMUST00000096101 508 ntBASIC17.37■□□□□ 0.37
Gm3543D3Z235 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm3543D3Z235 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3543D3Z235 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3543D3Z235 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Gm10493-201ENSMUST00000097270 612 ntBASIC17.34■□□□□ 0.37
Gm3543D3Z235 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3543D3Z235 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3543D3Z235 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.33■□□□□ 0.37
Gm3543D3Z235 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3543D3Z235 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.33■□□□□ 0.37
Gm3543D3Z235 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.33■□□□□ 0.37
Gm3543D3Z235 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3543D3Z235 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3543D3Z235 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3543D3Z235 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm3543D3Z235 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3543D3Z235 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3543D3Z235 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.32■□□□□ 0.36
Gm3543D3Z235 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3543D3Z235 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms