Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Shank1D3YZU1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Shank1D3YZU1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Shank1D3YZU1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank1D3YZU1 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank1D3YZU1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank1D3YZU1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank1D3YZU1 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Shank1D3YZU1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Shank1D3YZU1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.26■□□□□ 0.35
Shank1D3YZU1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Shank1D3YZU1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.25■□□□□ 0.35
Shank1D3YZU1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Shank1D3YZU1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Shank1D3YZU1 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.25■□□□□ 0.35
Shank1D3YZU1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank1D3YZU1 Rab3c-203ENSMUST00000224180 967 ntBASIC17.24■□□□□ 0.35
Shank1D3YZU1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank1D3YZU1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Shank1D3YZU1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.24■□□□□ 0.35
Shank1D3YZU1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank1D3YZU1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank1D3YZU1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank1D3YZU1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Shank1D3YZU1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank1D3YZU1 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank1D3YZU1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank1D3YZU1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank1D3YZU1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.23■□□□□ 0.35
Shank1D3YZU1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank1D3YZU1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Shank1D3YZU1 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Shank1D3YZU1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.22■□□□□ 0.35
Shank1D3YZU1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Shank1D3YZU1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Shank1D3YZU1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms