Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rfx8D3YU81 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rfx8D3YU81 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx8D3YU81 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.42■□□□□ 0.86
Rfx8D3YU81 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx8D3YU81 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx8D3YU81 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Rfx8D3YU81 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.41■□□□□ 0.86
Rfx8D3YU81 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx8D3YU81 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.4■□□□□ 0.86
Rfx8D3YU81 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx8D3YU81 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx8D3YU81 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx8D3YU81 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx8D3YU81 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx8D3YU81 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.39■□□□□ 0.86
Rfx8D3YU81 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx8D3YU81 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
Rfx8D3YU81 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Rfx8D3YU81 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Gm43060-201ENSMUST00000200621 289 ntBASIC20.37■□□□□ 0.85
Rfx8D3YU81 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx8D3YU81 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rfx8D3YU81 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx8D3YU81 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx8D3YU81 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx8D3YU81 Gm40848-201ENSMUST00000221998 324 ntBASIC20.36■□□□□ 0.85
Rfx8D3YU81 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx8D3YU81 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx8D3YU81 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx8D3YU81 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rfx8D3YU81 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rfx8D3YU81 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx8D3YU81 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.34■□□□□ 0.85
Rfx8D3YU81 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx8D3YU81 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rfx8D3YU81 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.34■□□□□ 0.85
Rfx8D3YU81 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx8D3YU81 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx8D3YU81 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx8D3YU81 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx8D3YU81 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfx8D3YU81 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms