Protein–RNA interactions for Protein: C0HKC9

Smok3b, Sperm motility kinase 3B, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smok3bC0HKC9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smok3bC0HKC9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.18■□□□□ 0.66
Smok3bC0HKC9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smok3bC0HKC9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smok3bC0HKC9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Smok3bC0HKC9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.16■□□□□ 0.66
Smok3bC0HKC9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smok3bC0HKC9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smok3bC0HKC9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smok3bC0HKC9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smok3bC0HKC9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
Smok3bC0HKC9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Smok3bC0HKC9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smok3bC0HKC9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Smok3bC0HKC9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.13■□□□□ 0.65
Smok3bC0HKC9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.12■□□□□ 0.65
Smok3bC0HKC9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smok3bC0HKC9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Smok3bC0HKC9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms