Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
Krt28A6BLY7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Krt28A6BLY7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Krt28A6BLY7 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Krt28A6BLY7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Krt28A6BLY7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Gm7860-201ENSMUST00000121190 879 ntBASIC21.51■■□□□ 1.03
Krt28A6BLY7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt28A6BLY7 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Krt28A6BLY7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Krt28A6BLY7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Dio3-201ENSMUST00000097228 1449 ntBASIC21.48■■□□□ 1.03
Krt28A6BLY7 Gm15565-201ENSMUST00000118890 427 ntBASIC21.48■■□□□ 1.03
Krt28A6BLY7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Krt28A6BLY7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Krt28A6BLY7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.46■■□□□ 1.03
Krt28A6BLY7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Krt28A6BLY7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Krt28A6BLY7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Krt28A6BLY7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Krt28A6BLY7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.46■■□□□ 1.03
Krt28A6BLY7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.46■■□□□ 1.03
Krt28A6BLY7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Krt28A6BLY7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Krt28A6BLY7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Krt28A6BLY7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Gm11643-201ENSMUST00000119578 864 ntBASIC21.45■■□□□ 1.02
Krt28A6BLY7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Gm18666-201ENSMUST00000190039 958 ntBASIC21.45■■□□□ 1.02
Krt28A6BLY7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Krt28A6BLY7 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.44■■□□□ 1.02
Krt28A6BLY7 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.44■■□□□ 1.02
Krt28A6BLY7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Krt28A6BLY7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Krt28A6BLY7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Krt28A6BLY7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Krt28A6BLY7 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Krt28A6BLY7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 AC153881.1-201ENSMUST00000214448 284 ntBASIC21.43■■□□□ 1.02
Krt28A6BLY7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Krt28A6BLY7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms