Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.38□□□□□ -0.75
Ubr4A2AN08 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 AC153890.1-201ENSMUST00000220021 2469 ntBASIC10.38□□□□□ -0.75
Ubr4A2AN08 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC10.38□□□□□ -0.75
Ubr4A2AN08 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Auts2-212ENSMUST00000178555 309 ntBASIC10.37□□□□□ -0.75
Ubr4A2AN08 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Gm2399-201ENSMUST00000104944 225 ntBASIC10.37□□□□□ -0.75
Ubr4A2AN08 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Ubr4A2AN08 Gm21814-202ENSMUST00000203277 873 ntBASIC10.37□□□□□ -0.75
Ubr4A2AN08 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Gm7153-201ENSMUST00000117092 455 ntBASIC10.36□□□□□ -0.75
Ubr4A2AN08 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Mzt1-203ENSMUST00000227948 952 ntBASIC10.36□□□□□ -0.75
Ubr4A2AN08 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ubr4A2AN08 AC115037.1-201ENSMUST00000223391 2173 ntBASIC10.36□□□□□ -0.75
Ubr4A2AN08 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC10.36□□□□□ -0.75
Ubr4A2AN08 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Gm24589-201ENSMUST00000116692 94 ntBASIC10.35□□□□□ -0.75
Ubr4A2AN08 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC10.35□□□□□ -0.75
Ubr4A2AN08 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 AC107452.1-201ENSMUST00000227963 481 ntBASIC10.35□□□□□ -0.75
Ubr4A2AN08 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ubr4A2AN08 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC10.34□□□□□ -0.75
Ubr4A2AN08 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.34□□□□□ -0.75
Ubr4A2AN08 Gm14057-201ENSMUST00000120631 482 ntBASIC10.34□□□□□ -0.75
Ubr4A2AN08 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ubr4A2AN08 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms