Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.04■□□□□ 0.16
Lnp1A0A1B0GSK3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lnp1A0A1B0GSK3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lnp1A0A1B0GSK3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lnp1A0A1B0GSK3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lnp1A0A1B0GSK3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lnp1A0A1B0GSK3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lnp1A0A1B0GSK3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lnp1A0A1B0GSK3 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lnp1A0A1B0GSK3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lnp1A0A1B0GSK3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm8493-201ENSMUST00000196881 489 ntBASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm43173-201ENSMUST00000202246 593 ntBASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lnp1A0A1B0GSK3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Wdr70-203ENSMUST00000227371 1130 ntBASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lnp1A0A1B0GSK3 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm6139-201ENSMUST00000079261 882 ntBASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Lnp1A0A1B0GSK3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Lnp1A0A1B0GSK3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Lnp1A0A1B0GSK3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms