Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm27011-201ENSMUST00000182352 972 ntBASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Iqck-206ENSMUST00000208658 2891 ntBASIC16.09■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rpl13a-ps1A0A140T8K2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Rpl13a-ps1A0A140T8K2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms