Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Cfap99A0A140LIX9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cfap99A0A140LIX9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap99A0A140LIX9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap99A0A140LIX9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap99A0A140LIX9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap99A0A140LIX9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap99A0A140LIX9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap99A0A140LIX9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cfap99A0A140LIX9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Cfap99A0A140LIX9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cfap99A0A140LIX9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.03■■□□□ 1.28
Cfap99A0A140LIX9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cfap99A0A140LIX9 Gm13234-201ENSMUST00000120010 747 ntBASIC23.03■■□□□ 1.28
Cfap99A0A140LIX9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.03■■□□□ 1.28
Cfap99A0A140LIX9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Cfap99A0A140LIX9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Cfap99A0A140LIX9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
Cfap99A0A140LIX9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cfap99A0A140LIX9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cfap99A0A140LIX9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cfap99A0A140LIX9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Cfap99A0A140LIX9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
Cfap99A0A140LIX9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cfap99A0A140LIX9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cfap99A0A140LIX9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC22.97■■□□□ 1.27
Cfap99A0A140LIX9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Cfap99A0A140LIX9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Gm27801-201ENSMUST00000184174 223 ntBASIC22.96■■□□□ 1.27
Cfap99A0A140LIX9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms