Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc194A0A140LIT1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc194A0A140LIT1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc194A0A140LIT1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc194A0A140LIT1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc194A0A140LIT1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc194A0A140LIT1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.14■□□□□ 0.65
Ccdc194A0A140LIT1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.14■□□□□ 0.65
Ccdc194A0A140LIT1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc194A0A140LIT1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.13■□□□□ 0.65
Ccdc194A0A140LIT1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc194A0A140LIT1 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.13■□□□□ 0.65
Ccdc194A0A140LIT1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc194A0A140LIT1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc194A0A140LIT1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ccdc194A0A140LIT1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc194A0A140LIT1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc194A0A140LIT1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc194A0A140LIT1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc194A0A140LIT1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Ccdc194A0A140LIT1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc194A0A140LIT1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc194A0A140LIT1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc194A0A140LIT1 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc194A0A140LIT1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ccdc194A0A140LIT1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms