Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv8-28A0A0G2JE47 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Igkv8-28A0A0G2JE47 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Igkv8-28A0A0G2JE47 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Igkv8-28A0A0G2JE47 Gm6627-201ENSMUST00000218299 2386 ntBASIC12.08□□□□□ -0.47
Igkv8-28A0A0G2JE47 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm10461-201ENSMUST00000202073 4786 ntBASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Grk6-206ENSMUST00000224995 2971 ntBASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm14523-201ENSMUST00000117260 558 ntBASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv8-28A0A0G2JE47 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm43182-201ENSMUST00000199476 2528 ntBASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv8-28A0A0G2JE47 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm11175-201ENSMUST00000116172 543 ntBASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm5540-201ENSMUST00000131852 1848 ntBASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv8-28A0A0G2JE47 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv8-28A0A0G2JE47 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms