Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trbv16A0A0B4J1H3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv16A0A0B4J1H3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv16A0A0B4J1H3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trbv16A0A0B4J1H3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trbv16A0A0B4J1H3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm10571-201ENSMUST00000097869 1638 ntBASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm22238-201ENSMUST00000175222 88 ntBASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trbv16A0A0B4J1H3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm5812-201ENSMUST00000061073 957 ntBASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm18688-201ENSMUST00000204695 1859 ntBASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 BC021767-201ENSMUST00000126387 1716 ntBASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trbv16A0A0B4J1H3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trbv16A0A0B4J1H3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms