Protein–RNA interactions for Protein: A0A0A6YYE5

Igkv4-78, Immunoglobulin kappa variable 4-78 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-78A0A0A6YYE5 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Igkv4-78A0A0A6YYE5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.65□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Etf1-202ENSMUST00000180351 108 ntBASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.61□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igkv4-78A0A0A6YYE5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms