Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-47A0A0A6YY41 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-47A0A0A6YY41 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-47A0A0A6YY41 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Ighv1-47A0A0A6YY41 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-47A0A0A6YY41 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-47A0A0A6YY41 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-47A0A0A6YY41 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-47A0A0A6YY41 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv1-47A0A0A6YY41 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-47A0A0A6YY41 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-47A0A0A6YY41 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-47A0A0A6YY41 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-47A0A0A6YY41 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-47A0A0A6YY41 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-47A0A0A6YY41 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-47A0A0A6YY41 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.83■□□□□ 0.12
Ighv1-47A0A0A6YY41 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-47A0A0A6YY41 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ighv1-47A0A0A6YY41 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-47A0A0A6YY41 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv1-47A0A0A6YY41 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms