Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ighv1-11A0A0A6YWI9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ighv1-11A0A0A6YWI9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv1-11A0A0A6YWI9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms