Protein–RNA interactions for Protein: A0A087WP44

Gm28897, Predicted gene 28827, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28897A0A087WP44 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gm28897A0A087WP44 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28897A0A087WP44 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28897A0A087WP44 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gm28897A0A087WP44 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28897A0A087WP44 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28897A0A087WP44 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Gm28897A0A087WP44 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Gm45444-201ENSMUST00000211394 898 ntBASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28897A0A087WP44 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gm28897A0A087WP44 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28897A0A087WP44 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28897A0A087WP44 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28897A0A087WP44 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28897A0A087WP44 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gm28897A0A087WP44 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gm28897A0A087WP44 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17■□□□□ 0.31
Gm28897A0A087WP44 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Golph3-205ENSMUST00000228671 2842 ntBASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gm28897A0A087WP44 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms