Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-5A0A075B6B5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-5A0A075B6B5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-5A0A075B6B5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-5A0A075B6B5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Gm27502-201ENSMUST00000183495 199 ntBASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-5A0A075B6B5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-5A0A075B6B5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms