Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav6d-7A0A075B6B0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
Trav6d-7A0A075B6B0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav6d-7A0A075B6B0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Golph3-205ENSMUST00000228671 2842 ntBASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav6d-7A0A075B6B0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Gm8770-201ENSMUST00000121113 1109 ntBASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.82□□□□□ -0.04
Trav6d-7A0A075B6B0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Gm43137-201ENSMUST00000198052 594 ntBASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trav6d-7A0A075B6B0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6d-7A0A075B6B0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav6d-7A0A075B6B0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6d-7A0A075B6B0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms