Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav9d-3A0A075B695 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-3A0A075B695 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-3A0A075B695 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-3A0A075B695 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-3A0A075B695 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav9d-3A0A075B695 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav9d-3A0A075B695 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav9d-3A0A075B695 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav9d-3A0A075B695 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav9d-3A0A075B695 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.72□□□□□ -0.21
Trav9d-3A0A075B695 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 AA386476-201ENSMUST00000098781 1665 ntBASIC13.71□□□□□ -0.21
Trav9d-3A0A075B695 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-3A0A075B695 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-3A0A075B695 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Trav9d-3A0A075B695 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav9d-3A0A075B695 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav9d-3A0A075B695 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Gm13241-201ENSMUST00000094493 780 ntBASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav9d-3A0A075B695 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms