Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trav18A0A075B656 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.11
Trav18A0A075B656 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav18A0A075B656 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav18A0A075B656 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.76■□□□□ 0.11
Trav18A0A075B656 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav18A0A075B656 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.75■□□□□ 0.11
Trav18A0A075B656 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav18A0A075B656 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav18A0A075B656 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
Trav18A0A075B656 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.74■□□□□ 0.11
Trav18A0A075B656 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Golgb1-201ENSMUST00000023534 498 ntBASIC15.74■□□□□ 0.11
Trav18A0A075B656 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav18A0A075B656 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.73■□□□□ 0.11
Trav18A0A075B656 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav18A0A075B656 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.72■□□□□ 0.11
Trav18A0A075B656 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.72■□□□□ 0.11
Trav18A0A075B656 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav18A0A075B656 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav18A0A075B656 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav18A0A075B656 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.71■□□□□ 0.1
Trav18A0A075B656 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav18A0A075B656 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav18A0A075B656 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav18A0A075B656 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms