Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-7-dv9A0A075B639 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav6-7-dv9A0A075B639 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.07■□□□□ 0.32
Trav6-7-dv9A0A075B639 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Trav6-7-dv9A0A075B639 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-7-dv9A0A075B639 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-7-dv9A0A075B639 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-7-dv9A0A075B639 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-7-dv9A0A075B639 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-7-dv9A0A075B639 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-7-dv9A0A075B639 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-7-dv9A0A075B639 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav6-7-dv9A0A075B639 Gm21956-201ENSMUST00000179946 522 ntBASIC17.02■□□□□ 0.32
Trav6-7-dv9A0A075B639 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav6-7-dv9A0A075B639 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav6-7-dv9A0A075B639 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-7-dv9A0A075B639 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-7-dv9A0A075B639 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav6-7-dv9A0A075B639 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Iqck-206ENSMUST00000208658 2891 ntBASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Gm12821-201ENSMUST00000120022 600 ntBASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Trav6-7-dv9A0A075B639 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms