Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm43530-201ENSMUST00000195920 274 ntBASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Gm45444-201ENSMUST00000211394 898 ntBASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
Trav4-2A0A075B638 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav4-2A0A075B638 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Gm12366-201ENSMUST00000121722 873 ntBASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Gm5786-201ENSMUST00000085368 882 ntBASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4-2A0A075B638 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.25■□□□□ 0.03
Trav4-2A0A075B638 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav4-2A0A075B638 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav4-2A0A075B638 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav4-2A0A075B638 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 133.5 ms